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I had this same problem but after I changed the Silencer it was still there so I look further. I found that if I bent the metal around the baja lights out away from the brackets that hold the light it stopped the rattle. You might try this.
I doubt anythings wrong with it im sure its just the engine vibration against the frame. Cause they dont have any rubber motor mounts on them i wouldnt worry.
alright guys thx allot for helping me find out what it was it turned out it was the baja lights in the front the plastic was rubbing on the top of them so i bent them down a tiny bit and tightened up the light bolts they were a bit loose to and its all smooth now.